CDS

Accession Number TCMCG006C06725
gbkey CDS
Protein Id XP_022569915.1
Location complement(join(29868..29993,30064..30303,30387..30504,30580..30647,30736..30987,31065..31235,31318..31413,31493..31639,31724..31790,31950..32125,32323..32490,32606..32719,32797..32910,32987..33205,33294..33473,33569..33672,33745..33951,34604..34676,34753..35172))
Gene LOC111212625
GeneID 111212625
Organism Brassica napus

Protein

Length 1019aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022714194.1
Definition protein translocase subunit SECA1, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category U
Description Protein translocase subunit
KEGG_TC 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03070        [VIEW IN KEGG]
EC -
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008320        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015399        [VIEW IN EMBL-EBI]
GO:0015405        [VIEW IN EMBL-EBI]
GO:0015440        [VIEW IN EMBL-EBI]
GO:0015450        [VIEW IN EMBL-EBI]
GO:0015462        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022884        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033220        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042626        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042887        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043492        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904680        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTCTCCACTCTGCGACTCTCAATTACTAAACCACCGCCCTTCGATCTCCCCTACACCTTCTCACTCCACGATCGCTGATCGAAAATTCCTCCGCCATAATCGTCCTCTGAGCTCTTCCCCGTTCCTGGGAAACGGAATCAAGCTAGGTGTATCAGGATGTAGTAGTAGGAGGTACTCTCTTCGGATTCGGAGGAGGAGCACGAGTGTAAACGCTTCGTTAGGCGGTCTTCTCAGCGGGATTTTCAAGACTTCTGATAACGGAGAGTCCACGAGGCAACAGTACGCATCAGTCGTGGCCTCCGTTAACCGCTTGGAGACGGAGATTTCGTCTCTTTCGGATTCGGATTTGCGAGGGAGGACCGATGCGTTGAAGCAACGAGCTCAACAAGGAGAATCCATGGATTCACTTCTACCTGAGGCGTATGCTGTTGTGAGAGAAGCTTCCAAGAGAGTTCTTGGACTCAGACCTTTCGATGTGCAACTGATAGGTGGTATGGTCCTCCATAAAGGAGAGATAGCTGAGATGAGAACTGGTGAAGGGAAAACTCTTGTAGCCATTTTACCTGCTTACTTGAATGCGTTAAGTGGGAAAGGTGTTCATGTGGTTACTGTCAATGATTATCTTGCTCGTAGAGATTGTGAATGGGTTGGTCAAGTTCCTCGCTTTCTTGGATTGAAGGTTGGTCTGATCCAACAGAATATGACACCTGAACAAAGAAAGGAAAATTATTTATGCGACATCACTTATGTCACCAACAGTGAGCTTGGATTCGACTATCTGAGAGACAATCTTGCCACGAGTGTGGAGGAGCTCGTCTTGAGGGATTTCAATTATTGTGTAATTGATGAAGTTGATTCCATACTTATTGATGAGGCAAGAACTCCTCTCATTATCTCTGGCCCTGCAGAGAAACCTAGTGAGCAATACTACAAAGCTGCCAAAATTGCTTCAGCCTTTGAGCGGGATATACATTACACTGTTGATGAAAAGCAAAAGACTGTTTTACTAACGGAACAAGGTTACGAAGATGCAGAAGAAATCCTGGACGTGAAAGATTTGTATGATCCTCGTGAACAATGGGCGTCATATCTTCTTAATGCCATTAAGGCAAAAGAACTGTTTCTCAGAGATGTGAACTATATCATCCGAACAAAGGAGGTTCTTATCGTGGATGAGTTTACTGGTCGTGTGATGCAGGGAAGACGTTGGAGTGACGGACTACATCAAGCAGTTGAAGCAAAAGAAGGCTTGCCAATTCAGAATGAATCTATTACACTGGCATCCATTAGTTATCAAAATTTCTTTCTCCAGTTCCCGAAACTTTGCGGGATGACTGGTACTGCATCAACCGAGAGTGCAGAATTTGAGAGCATATACAAGCTGAAAACTACAATTGTACCCACAAATAAGCCCATGATAAGAAAGGATGAGTCAGATGTGGTTTTCAAGGCAGTTAATGGCAAATGGCGGGCAGTGGTGGTGGAAATTTCTAGAATGCATAAGACTGGTAGAGCTGTGCTGGTTGGTACAACCAGCGTTGAGCAGAGTGACGAGCTTTCTCAACTATTGCAGGAAGCTGGAATAACTCACGAGGTCCTCAATGCAAAACCAGAGAATGTGGAGAGAGAAGCTGAAATTGTAGCACAAAGTGGTCGTTTTGGGGCTGTAACAATTGCCACAAATATGGCTGGGCGTGGGACAGACATTATTCTCGGTGGAAACGCAGAGTTTATGGCACGTTTGAAGCTCCGTGAGATACTTATGCCCAGAGTGGTGAAGCCTACTGATGGTGTTTTCGTATCTGTGAAGAAGGCCCCTCCCAAGAGGACGTGGAAGGTGAATGAGAAGTTATTTCCATGCAAATTGTCAAATGAGAGAGTGAAGCTAGCTGAGGAAGCTGTACAATCAGCTGTAGAGGCTTGGGGCCAGAAATCGTTAACTGAGCTTGAAGCAGAAGAACGTCTATCTTATTCTTGTGAAAAGGGTCCAGTTCAGGATGAAGTCATTGGTAAACTAAGGAACGCATTTCTTGAGATAGCAAAAGAATATAAGGGCTTCACAGATGAAGAAAGGAAAAAGGTTGTGGAAGCCGGTGGACTCCACGTGGTTGGGACGGAGAGGCATGAATCACGCCGTATTGACAATCAGCTGCGTGGGCGAAGTGGCCGCCAAGGGGATCCTGGAAGTTCCCGGTTCTTCCTTAGTCTTGAAGATAACATATTCCGCATTTTCGGGGGAGATCGGATCCAGGGTATGATGAGAGCATTCAGAGTTGAAGACTTACCAATCGAATCCAAGATGCTTACTAAAGCTCTAGATGAAGCTCAGAGAAAAGTGGAGAATTACTTCTTTGACATCAGGAAGCAACTGTTCGAATTTGATGAGGTTCTCAATAGCCAAAGAGATCGTGTTTACACAGAGAGGAGGCGCGCTCTTGTGTCAGACAGCCTTGAGCCTCTGATTATTGAGTATGCTGAGTTAACAATGGATGACATTCTAGAGGCAAATATTGGCCCGGATACTCCAAAAGAAAGCTGGGATCTTGAAAAGCTCATCGCCAAAGTTCAGCAGTACTGTTATCTGTTGAATGATCTCACTCCGGATTTGCTGAAAAGCCAAGGATCAAGTTACGAGGGATTGCAAGATTATCTCCGTGCCCGTGGCCGAGATGCATACTTGCAGAAAAGAGAAATAGTGGAGAAAGAAGCACCAGGGCTAATGAAAGATGCTGAACGTTTCTTAATCTTGAGCAATATAGACCGGTTATGGAAAGAACACCTTCAAGCACTCAAGTTCGTGCAACAAGCTGTTGGGCTTAGAGGATATGCGCAACGTGATCCGCTCATTGAGTATAAGCTTGAAGGATACAATCTATTTCTGGAAATGATGGCTCAAATAAGAAGAAACGTCATATACTCCATTTATCAGTTTCAACCAGTGATGGTGAAGAAGGATCAAGACAAGAAGTCTCAGAATGGGAAACCAAGCAAACAAGTGGATAAGCCTAATCAAGTCGGTGTCGCAGATGAGCCATCGTCAGTTGCTAGTGCCTAA
Protein:  
MVSPLCDSQLLNHRPSISPTPSHSTIADRKFLRHNRPLSSSPFLGNGIKLGVSGCSSRRYSLRIRRRSTSVNASLGGLLSGIFKTSDNGESTRQQYASVVASVNRLETEISSLSDSDLRGRTDALKQRAQQGESMDSLLPEAYAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTNSELGFDYLRDNLATSVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPSEQYYKAAKIASAFERDIHYTVDEKQKTVLLTEQGYEDAEEILDVKDLYDPREQWASYLLNAIKAKELFLRDVNYIIRTKEVLIVDEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTASTESAEFESIYKLKTTIVPTNKPMIRKDESDVVFKAVNGKWRAVVVEISRMHKTGRAVLVGTTSVEQSDELSQLLQEAGITHEVLNAKPENVEREAEIVAQSGRFGAVTIATNMAGRGTDIILGGNAEFMARLKLREILMPRVVKPTDGVFVSVKKAPPKRTWKVNEKLFPCKLSNERVKLAEEAVQSAVEAWGQKSLTELEAEERLSYSCEKGPVQDEVIGKLRNAFLEIAKEYKGFTDEERKKVVEAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGMMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQRDRVYTERRRALVSDSLEPLIIEYAELTMDDILEANIGPDTPKESWDLEKLIAKVQQYCYLLNDLTPDLLKSQGSSYEGLQDYLRARGRDAYLQKREIVEKEAPGLMKDAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNVIYSIYQFQPVMVKKDQDKKSQNGKPSKQVDKPNQVGVADEPSSVASA